ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z09D2 - ECOD Domain | ECOD

ECOD/Domains/e5z09D2

e5z09D2

UID: 002417478

PDB

Range: D:227-401
PDB: 5Z09 chain D(all domains)
UniProt: Q975F9 (all domains)
Gene: STK_04520

Molecule: Dual sugar-1-phosphate nucleotidylyltransferase

3D Structure

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Related Domains

Browse other domains in Hexapep, GMPPB_C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep, GMPPB_C(208.1.1.20)

Ligands

in contact, ≤ 4 Å

Uridine 5'-triphosphateUTP
drugDrugBank DB04005within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00132Hexapep

Bacterial transferase hexapeptide (six repeats)

ClanCL0536HEXAPEP

PF25087GMPPB_C

GMPPB C-terminal domain

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 5Z09 RCSB PDB: 5Z09 PDBe: 5Z09 UniProt: Q975F9

Downloads

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