ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z39A1 - ECOD Domain | ECOD

ECOD/Domains/e5z39A1

e5z39A1

UID: 002417587

PDB

Range: A:144-309
PDB: 5Z39 chain A(all domains)
UniProt: Q55BQ2 (all domains)
Gene: DDB_G0271086

Molecule: G-protein interacting protein 1

3D Structure

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Related Domains

Browse other domains in DUF758 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTumor necrosis factor alpha-induced protein 8-like protein 2(3832)

HH-groupTumor necrosis factor alpha-induced protein 8-like protein 2(3832.1)

TT-groupTumor necrosis factor alpha-induced protein 8-like protein 2(3832.1.1)

FFamilyDUF758(3832.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043
1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolaminePEF
drugDrugBank DB01728

Pfam Families

PF05527TNFAIP8

Tumor necrosis factor alpha-induced protein 8-like

External Links

ECOD PDB View: 5Z39 RCSB PDB: 5Z39 PDBe: 5Z39 UniProt: Q55BQ2

Downloads

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Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.