ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5oarD1 - ECOD Domain | ECOD

ECOD/Domains/e5oarD1

e5oarD1

UID: 002417906

PDB

Range: D:182-600
PDB: 5OAR chain D(all domains)
UniProt: Q8J2T0 (all domains)
Gene: nagA

Molecule: Beta-hexosaminidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_20 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_20(2002.1.1.33)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
N-Acetyl-glucosamine thiazolineNGT
drugDrugBank DB03747

Pfam Families

PF00728Glyco_hydro_20

Glycosyl hydrolase family 20, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5OAR RCSB PDB: 5OAR PDBe: 5OAR UniProt: Q8J2T0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Hexatantalum DodecabromideTBR

drugDrugBank DB04119

Chloride ionCL

alpha-D-mannopyranoseMAN

Shown in the structure viewer. Drug annotations from DrugDomain.