ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5jbdB1 - ECOD Domain | ECOD

ECOD/Domains/e5jbdB1

e5jbdB1

UID: 002417974

PDB

Range: B:1230-1354
PDB: 5JBD chain B(all domains)
UniProt: Q5SBM0 (all domains)
Gene: BJI45_02290

Molecule: Inactive glucansucrase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glyco_hydro_70 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyGlyco_hydro_70(12.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Acetate ion)

Sulfate ionSO4
DrugBank DB14546
Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02324Glyco_hydro_70

Glycosyl hydrolase family 70

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5JBD RCSB PDB: 5JBD PDBe: 5JBD UniProt: Q5SBM0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure