ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6dheI1 - ECOD Domain | ECOD

ECOD/Domains/e6dheI1

e6dheI1

UID: 002418797

PDB

Range: I:1-36
PDB: 6DHE chain I(all domains)
UniProt: Q8DJZ6 (all domains)
Gene: psbI

Molecule: Photosystem II reaction center protein I

3D Structure

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Related Domains

Browse other domains in PsbI →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein I, PsbI(5035)

HH-groupPhotosystem II reaction center protein I, PsbI(5035.1)

TT-groupPhotosystem II reaction center protein I, PsbI(5035.1.1)

FFamilyPsbI(5035.1.1.1)

Ligands

in contact, ≤ 4 Å

Digalactosyl Diacyl Glycerol (Dgdg)DGD
drugDrugBank DB03426
(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene8CT
Chlorophyll a

Pfam Families

Photosystem II reaction centre I protein (PSII 4.8 kDa protein)

External Links

ECOD PDB View: 6DHE RCSB PDB: 6DHE PDBe: 6DHE UniProt: Q8DJZ6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Unknown ligandUNL

Shown in the structure viewer. Drug annotations from DrugDomain.