ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ubwB1 - ECOD Domain | ECOD

ECOD/Domains/e5ubwB1

e5ubwB1

UID: 002419913

PDB

Range: B:-3-339
PDB: 5UBW chain B(all domains)
UniProt: Q8ZNG2 (all domains)
Gene: sseL

Molecule: Deubiquitinase SseL

3D Structure

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Related Domains

Browse other domains in ElaD-SseL-like_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyElaD-SseL-like_C(219.1.1.66)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22102ElaD-SseL-like_C

ElaD/SseL-like C-terminal

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5UBW RCSB PDB: 5UBW PDBe: 5UBW UniProt: Q8ZNG2

Downloads

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