ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fq3A1 - ECOD Domain | ECOD

ECOD/Domains/e6fq3A1

e6fq3A1

UID: 002419994

PDB

Range: A:540-824
PDB: 6FQ3 chain A(all domains)
UniProt: E7FAM5 (all domains)
Gene: trim71

Molecule: E3 ubiquitin-protein ligase TRIM71

3D Structure

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Related Domains

Browse other domains in NHL, DUF5128 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyNHL, DUF5128(5.1.3.140)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NHL repeat

ClanCL0186Beta_propeller

PF17170DUF5128

6-bladed beta-propeller

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6FQ3 RCSB PDB: 6FQ3 PDBe: 6FQ3 UniProt: E7FAM5

Downloads

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