ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6dhgV1 - ECOD Domain | ECOD

ECOD/Domains/e6dhgV1

e6dhgV1

UID: 002420282

PDB

Range: V:1-137
PDB: 6DHG chain V(all domains)
UniProt: P0A386 (all domains)
Gene: psbV

Molecule: Cytochrome c-550

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cytochrom_C550 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C550(107.1.1.10)

Ligands

in contact, ≤ 4 Å

Digalactosyl Diacyl Glycerol (Dgdg)DGD
drugDrugBank DB03426
Ferroheme CHEC
drugDrugBank DB03317within 5 Å only

Pfam Families

PF14495Cytochrom_C550

Cytochrome c-550 domain

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 6DHG RCSB PDB: 6DHG PDBe: 6DHG UniProt: P0A386

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.