ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6dhpe1 - ECOD Domain | ECOD

ECOD/Domains/e6dhpe1

e6dhpe1

UID: 002420387

PDB

Range: e:3-84
PDB: 6DHP chain e(all domains)
UniProt: Q8DIP0 (all domains)
Gene: psbE

Molecule: Cytochrome b559 subunit alpha

3D Structure

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Related Domains

Browse other domains in Cytochrom_B559,Cytochrom_B559a →

Classification

AArchitectureextended segments(a.20)

XX-groupCytochrome b559 subunits(5036)

HH-groupCytochrome b559 subunits(5036.1)

TT-groupCytochrome b559 subunits(5036.1.1)

FFamilyCytochrom_B559,Cytochrom_B559a(5036.1.1.2)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043

Pfam Families

PF00283Cytochrom_B559

Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits

PF00284Cytochrom_B559a

Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit

External Links

ECOD PDB View: 6DHP RCSB PDB: 6DHP PDBe: 6DHP UniProt: Q8DIP0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Beta caroteneBCR

drugDrugBank DB06755within 5 Å only

Digalactosyl Diacyl Glycerol (Dgdg)DGD

drugDrugBank DB03426within 5 Å only

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.