ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6eylB2 - ECOD Domain | ECOD

ECOD/Domains/e6eylB2

e6eylB2

UID: 002420469

PDB

Range: B:115-221
PDB: 6EYL chain B(all domains)
UniProt: Q45462 (all domains)
Gene: opuBC

Molecule: Osmotically activated L-carnitine/choline ABC transporter substrate-binding protein OpuCC

3D Structure

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Related Domains

Browse other domains in OpuAC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyOpuAC(7523.1.1.17)

Ligands

in contact, ≤ 4 Å

(3-Carboxy-2-(R)-Hydroxy-Propyl)-Trimethyl-Ammonium152
drugDrugBank DB02648

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Substrate binding domain of ABC-type glycine betaine transport system

ClanCL0177PBP

External Links

ECOD PDB View: 6EYL RCSB PDB: 6EYL PDBe: 6EYL UniProt: Q45462

Downloads

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