ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6eyqB1 - ECOD Domain | ECOD

ECOD/Domains/e6eyqB1

e6eyqB1

UID: 002420477

PDB

Range: B:13-114,B:222-283
PDB: 6EYQ chain B(all domains)
UniProt: Q45462 (all domains)
Gene: opuBC

Molecule: Choline-binding protein

3D Structure

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Related Domains

Browse other domains in OpuAC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyOpuAC(7523.1.1.17)

Ligands

in contact, ≤ 4 Å

CholineCHT
drugDrugBank DB00122

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Substrate binding domain of ABC-type glycine betaine transport system

ClanCL0177PBP

External Links

ECOD PDB View: 6EYQ RCSB PDB: 6EYQ PDBe: 6EYQ UniProt: Q45462

Downloads

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