ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6d2cA1 - ECOD Domain | ECOD

ECOD/Domains/e6d2cA1

e6d2cA1

UID: 002420857

RepresentativePDB

Range: A:44-303
PDB: 6D2C chain A(all domains)
UniProt: A0A084JZF2 (all domains)
Gene: IL45_01530

Molecule: Ulvan lyase

3D Structure

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Related Domains

Browse other domains in PL28 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyPL28(10.1.1.55)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

PL28 ulvan lyases

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6D2C RCSB PDB: 6D2C PDBe: 6D2C UniProt: A0A084JZF2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.