ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gykA4 - ECOD Domain | ECOD

ECOD/Domains/e6gykA4

e6gykA4

UID: 002426672

PDB

Range: A:1113-1141,A:1273-1330
PDB: 6GYK chain A(all domains)
UniProt: P04050 (all domains)
Gene: RPO21

Molecule: DNA-directed RNA polymerase II subunit RPB1

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupferredoxin-like domain in yeast RNA-polymerase beta-prime subunit(4956)

HH-groupferredoxin-like domain in yeast RNA-polymerase beta-prime subunit(4956.1)

TT-groupferredoxin-like domain in yeast RNA-polymerase beta-prime subunit(4956.1.1)

FFamilyRNA_pol_Rpb1_5(4956.1.1.1)

Pfam Families

PF04998RNA_pol_Rpb1_5

RNA polymerase Rpb1, domain 5

External Links

ECOD PDB View: 6GYK RCSB PDB: 6GYK PDBe: 6GYK UniProt: P04050

Downloads

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