ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6g4rB2 - ECOD Domain | ECOD

ECOD/Domains/e6g4rB2

e6g4rB2

UID: 002427940

PDB

Range: B:68-325
PDB: 6G4R chain B(all domains)
UniProt: Q8NP91 (all domains)
Gene: Cgl1925

Molecule: Hydrogen peroxide-inducible genes activator

3D Structure

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Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Ligands

in contact, ≤ 4 Å

Hydrogen peroxidePEO
drugDrugBank DB11091

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 6G4R RCSB PDB: 6G4R PDBe: 6G4R UniProt: Q8NP91

Downloads

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Drug annotations from DrugDomain.