ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gzaA1 - ECOD Domain | ECOD

ECOD/Domains/e6gzaA1

e6gzaA1

UID: 002428300

PDB

Range: A:1-87
PDB: 6GZA chain A(all domains)
UniProt: P03355 (all domains)
Gene: gag-pol

Molecule: Capsid protein

3D Structure

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Related Domains

Browse other domains in Gag_p30 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyGag_p30(170.1.1.2)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02093Gag_p30

Gag P30 core shell protein

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 6GZA RCSB PDB: 6GZA PDBe: 6GZA UniProt: P03355

Downloads

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