ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6i7vDS1 - ECOD Domain | ECOD

ECOD/Domains/e6i7vDS1

e6i7vDS1

UID: 002428485

PDB

Range: DS:1-103
PDB: 6I7V chain DS(all domains)
UniProt: P0AG48 (all domains)
Gene: rplU

Molecule: 50S ribosomal protein L21

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L21p →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRibosomal protein L21p(4186)

HH-groupRibosomal protein L21p(4186.1)

TT-groupRibosomal protein L21p(4186.1.1)

FFamilyRibosomal_L21p(4186.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Triethylene glycol, 1,2-ETHANEDIOL, Tetraethylene glycol)

Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
Tetraethylene glycolPG4

Pfam Families

PF00829Ribosomal_L21p

Ribosomal prokaryotic L21 protein

External Links

ECOD PDB View: 6I7V RCSB PDB: 6I7V PDBe: 6I7V UniProt: P0AG48

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.