ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i8bE2 - ECOD Domain | ECOD

ECOD/Domains/e6i8bE2

e6i8bE2

UID: 002428512

PDB

Range: E:119-194
PDB: 6I8B chain E(all domains)
UniProt: Q9Y657 (all domains)
Gene: SPIN1

Molecule: Spindlin-1

3D Structure

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Related Domains

Browse other domains in Spin-Ssty →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySpin-Ssty(4.1.1.31)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
2-[4-[2-[[2-[3-[2-azanyl-5-(cyclopropylmethoxy)-3,3-dimethyl-indol-6-yl]oxypropyl]-1,3-dihydroisoindol-5-yl]oxy]ethyl]-1,2,3-triazol-1-yl]-1-[4-(2-pyrrolidin-1-ylethyl)piperidin-1-yl]ethanoneH7T

+ 1 additive (Dimethyl sulfoxide)

Pfam Families

PF02513Spin-Ssty

Spin/Ssty Family

ClanCL0010SH3

External Links

ECOD PDB View: 6I8B RCSB PDB: 6I8B PDBe: 6I8B UniProt: Q9Y657

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxideDMS
DrugBank DB01093within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.