ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yvaA1 - ECOD Domain | ECOD

ECOD/Domains/e5yvaA1

e5yvaA1

UID: 002428947

PDB

Range: A:160-199,A:231-448
PDB: 5YVA chain A(all domains)
UniProt: Q96RR4 (all domains)
Gene: CAMKK2

Molecule: Calcium/calmodulin-dependent protein kinase kinase 2

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

3-(1H-tetrazol-5-yl)-10lambda~6~-thioxanthene-9,10,10-trione91X
Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5YVA RCSB PDB: 5YVA PDBe: 5YVA UniProt: Q96RR4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.