ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5yvbA1 - ECOD Domain | ECOD

ECOD/Domains/e5yvbA1

e5yvbA1

UID: 002428948

PDB

Range: A:160-199,A:231-448
PDB: 5YVB chain A(all domains)
UniProt: Q96RR4 (all domains)
Gene: CAMKK2

Molecule: Calcium/calmodulin-dependent protein kinase kinase 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

(3Z)-5-chloro-3-[(1-methyl-1H-pyrazol-4-yl)methylidene]-1,3-dihydro-2H-indol-2-one92C
Chloride ionCL

+ 2 additives (Glycerin, Triethylene glycol)

GlycerinGOL

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5YVB RCSB PDB: 5YVB PDBe: 5YVB UniProt: Q96RR4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Triethylene glycolPGE

DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.