ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yx1C1 - ECOD Domain | ECOD

ECOD/Domains/e5yx1C1

e5yx1C1

UID: 002428969

PDB

Range: C:2-73
PDB: 5YX1 chain C(all domains)
UniProt: O60760 (all domains)
Gene: HPGDS

Molecule: Hematopoietic prostaglandin D synthase

3D Structure

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Related Domains

Browse other domains in GST_N →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyGST_N(2485.1.1.13)

Ligands

in contact, ≤ 4 Å

GlutathioneGSH
drugDrugBank DB00143
ethyl 4-[(8R)-3,8-dimethyl-4-oxo-4,6,7,8,9,10-hexahydrothieno[2',3':4,5]pyrimido[1,2-a]azepin-2-yl]carbamoylpiperazine-1-carboxylateUX4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Glutathione S-transferase, N-terminal domain

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 5YX1 RCSB PDB: 5YX1 PDBe: 5YX1 UniProt: O60760

Downloads

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