ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yz4A1 - ECOD Domain | ECOD

ECOD/Domains/e5yz4A1

e5yz4A1

UID: 002429029

PDB

Range: A:60-192
PDB: 5YZ4 chain A(all domains)
UniProt: O13610 (all domains)
Gene: fcf1

Molecule: rRNA-processing protein fcf1

3D Structure

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Related Domains

Browse other domains in Fcf1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyFcf1(2006.1.4.6)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Fcf1

ClanCL0280PIN

External Links

ECOD PDB View: 5YZ4 RCSB PDB: 5YZ4 PDBe: 5YZ4 UniProt: O13610

Downloads

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