ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6acsB1 - ECOD Domain | ECOD

ECOD/Domains/e6acsB1

e6acsB1

UID: 002429055

PDB

Range: B:6-253
PDB: 6ACS chain B(all domains)
UniProt: A0A0D5YHU7 (all domains)
Gene: uppS

Molecule: Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Isopropyl alcohol)

GlycerinGOL
DrugBank DB09462
Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 6ACS RCSB PDB: 6ACS PDBe: 6ACS UniProt: A0A0D5YHU7

Downloads

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