ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6dz8A1 - ECOD Domain | ECOD

ECOD/Domains/e6dz8A1

e6dz8A1

UID: 002429120

PDB

Range: A:315-383
PDB: 6DZ8 chain A(all domains)
UniProt: A0A0H2WY27 (all domains)
Gene: pbp4

Molecule: Penicillin-binding protein 4

3D Structure

Loading viewer...

Related Domains

Browse other domains in DUF1958 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupPenicillin-binding protein associated domain(51)

HH-groupPenicillin-binding protein associated domain(51.1)

TT-groupPenicillin-binding protein associated domain(51.1.1)

FFamilyDUF1958(51.1.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09211DUF1958

Domain of unknown function (DUF1958)

External Links

ECOD PDB View: 6DZ8 RCSB PDB: 6DZ8 PDBe: 6DZ8 UniProt: A0A0H2WY27

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure