ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z2vB3 - ECOD Domain | ECOD

ECOD/Domains/e5z2vB3

e5z2vB3

UID: 002429635

PDB

Range: B:77-197
PDB: 5Z2V chain B(all domains)
UniProt: Q9I3H9 (all domains)
Gene: recR

Molecule: Recombination protein RecR

3D Structure

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Related Domains

Browse other domains in Toprim_4,RecR_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyToprim_4,RecR_C(2006.1.3.8)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13662Toprim_4

Toprim domain

ClanCL0413Toprim-like

RecR, C-terminal

External Links

ECOD PDB View: 5Z2V RCSB PDB: 5Z2V PDBe: 5Z2V UniProt: Q9I3H9

Downloads

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