ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6f00C1 - ECOD Domain | ECOD

ECOD/Domains/e6f00C1

e6f00C1

UID: 002430488

PDB

Range: C:347-441
PDB: 6F00 chain C(all domains)
UniProt: Q9NX74 (all domains)
Gene: DUS2

Molecule: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like

3D Structure

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Related Domains

Browse other domains in dsrm →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilydsrm(330.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Double-stranded RNA binding motif

ClanCL0196DSRM

External Links

ECOD PDB View: 6F00 RCSB PDB: 6F00 PDBe: 6F00 UniProt: Q9NX74

Downloads

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