ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6imfA1 - ECOD Domain | ECOD

ECOD/Domains/e6imfA1

e6imfA1

UID: 002430615

PDB

Range: A:2-164
PDB: 6IMF chain A(all domains)
UniProt: Q8JI39 (all domains)

Molecule: Cysteine-rich venom protein triflin

3D Structure

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Related Domains

Browse other domains in CAP →

Classification

AArchitecturea+b three layers(a.12)

XX-groupPR-1-like(273)

HH-groupPR-1-like(273.1)

TT-groupPR-1-like(273.1.1)

FFamilyCAP(273.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid)

GlycerinGOL
DrugBank DB09462
2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer.

Pfam Families

Cysteine-rich secretory protein family

ClanCL0659CAP

External Links

ECOD PDB View: 6IMF RCSB PDB: 6IMF PDBe: 6IMF UniProt: Q8JI39

Downloads

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Drug annotations from DrugDomain.