ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6monB1 - ECOD Domain | ECOD

ECOD/Domains/e6monB1

e6monB1

UID: 002430628

PDB

Range: B:5-270
PDB: 6MON chain B(all domains)
UniProt: Q9NRG4 (all domains)
Gene: SMYD2

Molecule: N-lysine methyltransferase SMYD2

3D Structure

Loading viewer...

Related Domains

Browse other domains in SET, zf-MYND →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET, zf-MYND(70.3.1.11)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SET domain

ClanCL0489SAF

PF01753zf-MYND

MYND finger

ClanCL0175TRASH

External Links

ECOD PDB View: 6MON RCSB PDB: 6MON PDBe: 6MON UniProt: Q9NRG4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure