ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6eciE1 - ECOD Domain | ECOD

ECOD/Domains/e6eciE1

e6eciE1

UID: 002431826

PDB

Range: E:14-137
PDB: 6ECI chain E(all domains)
UniProt: I7GF07 (all domains)
Gene: MSMEI_5105

Molecule: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein

3D Structure

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Related Domains

Browse other domains in Pyridox_ox_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPyridox_ox_2(1.1.5.31)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12900Pyridox_ox_2

Pyridoxamine 5'-phosphate oxidase

ClanCL0336FMN-binding

External Links

ECOD PDB View: 6ECI RCSB PDB: 6ECI PDBe: 6ECI UniProt: I7GF07

Downloads

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