ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6eedA1 - ECOD Domain | ECOD

ECOD/Domains/e6eedA1

e6eedA1

UID: 002431875

PDB

Range: A:196-391
PDB: 6EED chain A(all domains)
UniProt: O96935 (all domains)
Gene: M1AAP

Molecule: M1 family aminopeptidase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M1_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupBaculovirus p35 protein-related(4081)

HH-groupBaculovirus p35 protein-related(4081.1)

TT-groupBaculovirus p35 protein-related(4081.1.1)

FFamilyPeptidase_M1_N(4081.1.1.5)

Ligands

in contact, ≤ 4 Å

(2R)-2-[(cyclohexylacetyl)amino]-N-hydroxy-2-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)acetamideJ6A
Magnesium ionMG
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17900Peptidase_M1_N

Peptidase M1 N-terminal domain

ClanCL0672p35

External Links

ECOD PDB View: 6EED RCSB PDB: 6EED PDBe: 6EED UniProt: O96935

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure