ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fpiT1 - ECOD Domain | ECOD

ECOD/Domains/e6fpiT1

e6fpiT1

UID: 002431941

PDB

Range: T:4-177
PDB: 6FPI chain T(all domains)
UniProt: P69739 (all domains)
Gene: hyaA

Molecule: Hydrogenase-1 small chain

3D Structure

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Related Domains

Browse other domains in Oxidored_q6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyOxidored_q6(2007.1.3.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE4-S3 CLUSTERSF3
FE3-S4 CLUSTERF3S
within 5 Å only

Pfam Families

PF01058Oxidored_q6

NADH ubiquinone oxidoreductase, 20 Kd subunit

ClanCL0304CheY

External Links

ECOD PDB View: 6FPI RCSB PDB: 6FPI PDBe: 6FPI UniProt: P69739

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.