ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gpaB1 - ECOD Domain | ECOD

ECOD/Domains/e6gpaB1

e6gpaB1

UID: 002432004

PDB

Range: B:42-351
PDB: 6GPA chain B(all domains)
UniProt: Q89YR3 (all domains)
Gene: BT_4668

Molecule: Arabinogalactan endo-beta-1,4-galactanase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_53 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_53(2002.1.1.151)

Ligands

in contact, ≤ 4 Å

beta-D-galactopyranoseGAL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07745Glyco_hydro_53

Glycosyl hydrolase family 53

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6GPA RCSB PDB: 6GPA PDBe: 6GPA UniProt: Q89YR3

Downloads

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