ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6greB1 - ECOD Domain | ECOD

ECOD/Domains/e6greB1

e6greB1

UID: 002432009

PDB

Range: B:29-135
PDB: 6GRE chain B(all domains)
UniProt: Q8GUJ2 (all domains)
Gene: PDLP5

Molecule: Cysteine-rich repeat secretory protein 2

3D Structure

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Related Domains

Browse other domains in Stress-antifung →

Classification

AArchitecturea+b two layers(a.11)

XX-groupYeast killer toxin-like(3887)

HH-groupAntifungal protein ginkbilobin-2(3887.2)

TT-groupAntifungal protein ginkbilobin-2(3887.2.1)

FFamilyStress-antifung(3887.2.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
Sodium ionNA
metal

+ 3 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL)

GlycerinGOL

Pfam Families

PF01657Stress-antifung

Salt stress response/antifungal

ClanCL0812YKT-like_S

External Links

ECOD PDB View: 6GRE RCSB PDB: 6GRE PDBe: 6GRE UniProt: Q8GUJ2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.