ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6gtgA4 - ECOD Domain | ECOD

ECOD/Domains/e6gtgA4

e6gtgA4

UID: 002432040

PDB

Range: A:893-1084,A:1248-1300
PDB: 6GTG chain A(all domains)
UniProt: A0Q7Q2 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cas12a

3D Structure

Loading viewer...

Related Domains

Browse other domains in RuvC_1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRuvC_1(2484.1.1.84)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RuvC nuclease domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 6GTG RCSB PDB: 6GTG PDBe: 6GTG UniProt: A0Q7Q2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure