ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mbkB2 - ECOD Domain | ECOD

ECOD/Domains/e6mbkB2

e6mbkB2

UID: 002432888

PDB

Range: B:335-500
PDB: 6MBK chain B(all domains)
UniProt: Q86TU7 (all domains)
Gene: SETD3

Molecule: Histone-lysine N-methyltransferase setd3

3D Structure

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Related Domains

Browse other domains in Rubis-subs-bind →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRuBisCo LSMT C-terminal, substrate-binding domain(630)

HH-groupRuBisCo LSMT C-terminal, substrate-binding domain(630.1)

TT-groupRuBisCo LSMT C-terminal, substrate-binding domain(630.1.1)

FFamilyRubis-subs-bind(630.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF09273Rubis-subs-bind

Rubisco LSMT substrate-binding

External Links

ECOD PDB View: 6MBK RCSB PDB: 6MBK PDBe: 6MBK UniProt: Q86TU7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.