ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mdeB1 - ECOD Domain | ECOD

ECOD/Domains/e6mdeB1

e6mdeB1

UID: 002432893

PDB

Range: B:157-301
PDB: 6MDE chain B(all domains)
UniProt: Q8PW39 (all domains)
Gene: mvk

Molecule: Mevalonate kinase

3D Structure

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Related Domains

Browse other domains in GHMP_kinases_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGHMP Kinase, C-terminal domain(304.1)

TT-groupGHMP Kinase, C-terminal domain(304.1.1)

FFamilyGHMP_kinases_C(304.1.1.1)

Ligands

in contact, ≤ 4 Å

Mevalonic acidMEV
drugDrugBank DB03518

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF08544GHMP_kinases_C

GHMP kinases C terminal

ClanCL0677GHMP_C

External Links

ECOD PDB View: 6MDE RCSB PDB: 6MDE PDBe: 6MDE UniProt: Q8PW39

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.