ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ncsB1 - ECOD Domain | ECOD

ECOD/Domains/e6ncsB1

e6ncsB1

UID: 002433255

PDB

Range: B:-2-282
PDB: 6NCS chain B(all domains)
UniProt: Q04TM5 (all domains)
Gene: LBJ_1133

Molecule: N-acetylneuraminic acid (Sialic acid) synthetase

3D Structure

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Related Domains

Browse other domains in NeuB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNeuB(2002.1.1.109)

Ligands

in contact, ≤ 4 Å

D-tartaric acidTAR
drugDrugBank DB01694
Iodide ionIOD
MANGANESE (II) IONMN

Pfam Families

NeuB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6NCS RCSB PDB: 6NCS PDBe: 6NCS UniProt: Q04TM5

Downloads

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metal

+ 2 additives (Citric acid, Formic acid)

Citric acidCIT
DrugBank DB04272
Formic acidFMT
DrugBank DB01942within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.