ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5qjnA1 - ECOD Domain | ECOD

ECOD/Domains/e5qjnA1

e5qjnA1

UID: 002433439

PDB

Range: A:14-207
PDB: 5QJN chain A(all domains)
UniProt: Q9UKK9 (all domains)
Gene: NUDT5

Molecule: ADP-sugar pyrophosphatase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

(2S,3R)-2,3-dimethyl-4-(3-methyl-1,2,4-thiadiazol-5-yl)morpholineK1J
Magnesium ionMG
metal
Chloride ionCL

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5QJN RCSB PDB: 5QJN PDBe: 5QJN UniProt: Q9UKK9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.