ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5qjrA1 - ECOD Domain | ECOD

ECOD/Domains/e5qjrA1

e5qjrA1

UID: 002433455

PDB

Range: A:14-207
PDB: 5QJR chain A(all domains)
UniProt: Q9UKK9 (all domains)
Gene: NUDT5

Molecule: ADP-sugar pyrophosphatase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

(3R)-1-acetylpiperidine-3-carboxamideK1V
Magnesium ionMG
metal
Chloride ionCL

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5QJR RCSB PDB: 5QJR PDBe: 5QJR UniProt: Q9UKK9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.