ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z37A1 - ECOD Domain | ECOD

ECOD/Domains/e5z37A1

e5z37A1

UID: 002433629

PDB

Range: A:4-249
PDB: 5Z37 chain A(all domains)
UniProt: P11140 (all domains)

Molecule: Abrin A-chain

3D Structure

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Related Domains

Browse other domains in RIP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRIP/Polo-box domain(292)

HH-groupRibosome inactivating proteins (RIP)(292.1)

TT-groupRibosome inactivating proteins (RIP)(292.1.1)

FFamilyRIP(292.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ribosome inactivating protein

External Links

ECOD PDB View: 5Z37 RCSB PDB: 5Z37 PDBe: 5Z37 UniProt: P11140

Downloads

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