ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5z54B1 - ECOD Domain | ECOD

ECOD/Domains/e5z54B1

e5z54B1

UID: 002433634

PDB

Range: B:27-225
PDB: 5Z54 chain B(all domains)
UniProt: A0A076NBW8 (all domains)
Gene: hpiU5

Molecule: 12-epi-hapalindole C/U synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in HpiC1-like →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyHpiC1-like(10.32.1.91)

Ligands

in contact, ≤ 4 Å

amino({3-[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]propyl}amino)methaniminium0HZ
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22825HpiC1-like

HpiC1 cyclase

ClanCL0202GBD

External Links

ECOD PDB View: 5Z54 RCSB PDB: 5Z54 PDBe: 5Z54 UniProt: A0A076NBW8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure