ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mjaC2 - ECOD Domain | ECOD

ECOD/Domains/e6mjaC2

e6mjaC2

UID: 002439010

PDB

Range: C:2-115
PDB: 6MJA chain C(all domains)
UniProt: K7N5M3 (all domains)
Gene: B2M

Molecule: T cell receptor alpha variable 11,T cell receptor alpha variable 11,T cell receptor alpha joining 18,Human nkt tcr alpha chain, CHIMERIC PROTEIN

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

N-[(2S,3S,4R)-3,4-dihydroxy-1-({4-O-[(4-methylphenyl)methyl]-alpha-D-galactopyranosyl}oxy)octadecan-2-yl]hexacosanamideJTJ
Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 6MJA RCSB PDB: 6MJA PDBe: 6MJA UniProt: K7N5M3

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.