ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rd9D1 - ECOD Domain | ECOD

ECOD/Domains/e1rd9D1

e1rd9D1

UID: 000024392

PDB

Range: D:1-103
PDB: 1RD9 chain D(all domains)
UniProt: P01556 (all domains)
Gene: ctxB

Molecule: cholera toxin B protein (CTB)

3D Structure

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Related Domains

Browse other domains in Enterotoxin_b →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupBacterial enterotoxins(2.2)

TT-groupBacterial enterotoxins(2.2.1)

FFamilyEnterotoxin_b(2.2.1.2)

Ligands

in contact, ≤ 4 Å

BV2BV2
drugDrugBank DB02574
Hexaethylene glycolP6G

+ 1 additive (Tromethamine)

Tromethamine

Pfam Families

PF01376Enterotoxin_b

Heat-labile enterotoxin beta chain

ClanCL0658OB_enterotoxin

External Links

ECOD PDB View: 1RD9 RCSB PDB: 1RD9 PDBe: 1RD9 UniProt: P01556

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.