ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cwyD2 - ECOD Domain | ECOD

ECOD/Domains/e6cwyD2

e6cwyD2

UID: 002439939

PDB

Range: D:3-167,D:383-444
PDB: 6CWY chain D(all domains)
UniProt: Q9UBT2 (all domains)
Gene: UBA2

Molecule: SUMO-activating enzyme subunit 2

3D Structure

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Related Domains

Browse other domains in ThiF →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupActivating enzymes of the ubiquitin-like proteins(2003.1.9)

FFamilyThiF(2003.1.9.1)

Ligands

in contact, ≤ 4 Å

dimethyl (1S,2S,3R,4R)-1-[(1S)-2-(4-methylphenyl)-1-(phenylamino)ethyl]-7-oxabicyclo[2.2.1]hept-5-ene-2,3-dicarboxylateFHJ
Magnesium ionMG
metal
Zinc ionZN

Pfam Families

ThiF family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6CWY RCSB PDB: 6CWY PDBe: 6CWY UniProt: Q9UBT2

Downloads

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metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.