ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6edqB1 - ECOD Domain | ECOD

ECOD/Domains/e6edqB1

e6edqB1

UID: 002439970

PDB

Range: B:5-279
PDB: 6EDQ chain B(all domains)
UniProt: L1J207 (all domains)
Gene: GUITHDRAFT_111593

Molecule: Anion channelrhodopsin 1

3D Structure

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Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 6EDQ RCSB PDB: 6EDQ PDBe: 6EDQ UniProt: L1J207

Downloads

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