ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6iqwE2 - ECOD Domain | ECOD

ECOD/Domains/e6iqwE2

e6iqwE2

UID: 002440146

PDB

Range: E:2-205
PDB: 6IQW chain E(all domains)
UniProt: B6YWC1 (all domains)
Gene: csm4

Molecule: Csm4

3D Structure

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Related Domains

Browse other domains in RAMPs →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyRAMPs(304.51.1.2)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 6IQW RCSB PDB: 6IQW PDBe: 6IQW UniProt: B6YWC1

Downloads

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