ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ncgA1 - ECOD Domain | ECOD

ECOD/Domains/e6ncgA1

e6ncgA1

UID: 002440202

PDB

Range: A:14-326
PDB: 6NCG chain A(all domains)
UniProt: Q86Y07 (all domains)
Gene: VRK2

Molecule: Serine/threonine-protein kinase VRK2

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

4-[6-amino-5-(3,5-difluoro-4-hydroxyphenyl)pyridin-3-yl]benzene-1-sulfonamideKJD

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 6NCG RCSB PDB: 6NCG PDBe: 6NCG UniProt: Q86Y07

Downloads

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