ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6aq4C1 - ECOD Domain | ECOD

ECOD/Domains/e6aq4C1

e6aq4C1

UID: 002440669

PDB

Range: C:9-275
PDB: 6AQ4 chain C(all domains)
UniProt: P9WPE1 (all domains)
Gene: citE

Molecule: Citrate lyase subunit beta-like protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in HpcH_HpaI, C-C_Bond_Lyase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHpcH_HpaI, C-C_Bond_Lyase(2002.1.1.300)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
Chloride ionCL
Citramalyl-CoACQM

Pfam Families

PF03328HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase

ClanCL0036TIM_barrel

PF15617C-C_Bond_Lyase

C-C_Bond_Lyase of the TIM-Barrel fold

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6AQ4 RCSB PDB: 6AQ4 PDBe: 6AQ4 UniProt: P9WPE1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metal

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.