ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yf0B1 - ECOD Domain | ECOD

ECOD/Domains/e5yf0B1

e5yf0B1

UID: 002440810

PDB

Range: B:59-409
PDB: 5YF0 chain B(all domains)
UniProt: Q8N4J0 (all domains)
Gene: CARNMT1

Molecule: Carnosine N-methyltransferase

3D Structure

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Related Domains

Browse other domains in CARME →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyCARME(2003.1.5.63)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Calcium ionCA
metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

Pfam Families

Carnosine N-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5YF0 RCSB PDB: 5YF0 PDBe: 5YF0 UniProt: Q8N4J0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.