ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6nkeA1 - ECOD Domain | ECOD

ECOD/Domains/e6nkeA1

e6nkeA1

UID: 002442149

PDB

Range: A:1-249
PDB: 6NKE chain A(all domains)
UniProt: Q97AR4 (all domains)
Gene: TV0745

Molecule: Geranylgeranylglyceryl phosphate synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in His_biosynth, PcrB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHis_biosynth, PcrB(2002.1.1.277)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Imidazole, Sulfate ion)

GlycerinGOL
DrugBank DB09462
ImidazoleIMD
DrugBank DB03366
Sulfate ion

Pfam Families

PF00977His_biosynth

Histidine biosynthesis protein

ClanCL0036TIM_barrel

PcrB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6NKE RCSB PDB: 6NKE PDBe: 6NKE UniProt: Q97AR4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.