ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zypA1 - ECOD Domain | ECOD

ECOD/Domains/e5zypA1

e5zypA1

UID: 002442373

PDB

Range: A:10-308,A:1041-1047
PDB: 5ZYP chain A(all domains)
UniProt: P38351 (all domains)
Gene: PAF1

Molecule: RNA polymerase-associated protein CTR9,RNA polymerase II-associated protein 1

3D Structure

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Related Domains

Browse other domains in TPR_8 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_8(109.4.1.192)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

External Links

ECOD PDB View: 5ZYP RCSB PDB: 5ZYP PDBe: 5ZYP UniProt: P38351

Downloads

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